Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rai1Q61818 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rai1Q61818 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17■□□□□ 0.31
Rai1Q61818 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rai1Q61818 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rai1Q61818 Gm6627-201ENSMUST00000218299 2386 ntBASIC17■□□□□ 0.31
Rai1Q61818 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rai1Q61818 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rai1Q61818 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rai1Q61818 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.99■□□□□ 0.31
Rai1Q61818 Gm7461-201ENSMUST00000058918 827 ntBASIC16.99■□□□□ 0.31
Rai1Q61818 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Gm11355-201ENSMUST00000121120 306 ntBASIC16.99■□□□□ 0.31
Rai1Q61818 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.99■□□□□ 0.31
Rai1Q61818 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rai1Q61818 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rai1Q61818 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rai1Q61818 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Rai1Q61818 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Mir8112-201ENSMUST00000184382 131 ntBASIC16.98■□□□□ 0.31
Rai1Q61818 Gm37722-201ENSMUST00000193757 208 ntBASIC16.98■□□□□ 0.31
Rai1Q61818 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.98■□□□□ 0.31
Rai1Q61818 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rai1Q61818 Mir770-201ENSMUST00000103252 94 ntBASIC16.97■□□□□ 0.31
Rai1Q61818 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rai1Q61818 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rai1Q61818 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rai1Q61818 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Rai1Q61818 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rai1Q61818 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Rai1Q61818 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rai1Q61818 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rai1Q61818 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rai1Q61818 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rai1Q61818 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rai1Q61818 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rai1Q61818 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rai1Q61818 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rai1Q61818 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rai1Q61818 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Rai1Q61818 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Rai1Q61818 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.96■□□□□ 0.31
Rai1Q61818 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rai1Q61818 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rai1Q61818 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rai1Q61818 Actl10-202ENSMUST00000226583 1501 ntBASIC16.95■□□□□ 0.3
Rai1Q61818 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.95■□□□□ 0.3
Rai1Q61818 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rai1Q61818 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.95■□□□□ 0.3
Rai1Q61818 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.95■□□□□ 0.3
Rai1Q61818 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rai1Q61818 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rai1Q61818 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rai1Q61818 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.94■□□□□ 0.3
Rai1Q61818 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Rai1Q61818 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms