Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sox17Q61473 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sox17Q61473 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sox17Q61473 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox17Q61473 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Sox17Q61473 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sox17Q61473 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.53■□□□□ 0.24
Sox17Q61473 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sox17Q61473 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox17Q61473 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox17Q61473 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Haglr-201ENSMUST00000100000 2085 ntBASIC16.52■□□□□ 0.24
Sox17Q61473 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox17Q61473 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sox17Q61473 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.52■□□□□ 0.23
Sox17Q61473 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox17Q61473 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox17Q61473 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.52■□□□□ 0.23
Sox17Q61473 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.52■□□□□ 0.23
Sox17Q61473 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox17Q61473 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox17Q61473 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.51■□□□□ 0.23
Sox17Q61473 Gm9988-201ENSMUST00000069786 435 ntBASIC16.51■□□□□ 0.23
Sox17Q61473 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox17Q61473 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox17Q61473 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Sox17Q61473 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.5■□□□□ 0.23
Sox17Q61473 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sox17Q61473 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sox17Q61473 Gm43060-201ENSMUST00000200621 289 ntBASIC16.5■□□□□ 0.23
Sox17Q61473 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox17Q61473 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.5■□□□□ 0.23
Sox17Q61473 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Sox17Q61473 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox17Q61473 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sox17Q61473 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sox17Q61473 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox17Q61473 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Sox17Q61473 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox17Q61473 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms