Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.57■□□□□ 0.08
Traf4Q61382 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.57■□□□□ 0.08
Traf4Q61382 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Traf4Q61382 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Traf4Q61382 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Traf4Q61382 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Traf4Q61382 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Traf4Q61382 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.56■□□□□ 0.08
Traf4Q61382 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.56■□□□□ 0.08
Traf4Q61382 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.56■□□□□ 0.08
Traf4Q61382 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.56■□□□□ 0.08
Traf4Q61382 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Traf4Q61382 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Traf4Q61382 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Traf4Q61382 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Traf4Q61382 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Traf4Q61382 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Traf4Q61382 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Traf4Q61382 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Traf4Q61382 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Traf4Q61382 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.55■□□□□ 0.08
Traf4Q61382 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Traf4Q61382 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Traf4Q61382 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Traf4Q61382 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.54■□□□□ 0.08
Traf4Q61382 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.54■□□□□ 0.08
Traf4Q61382 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Traf4Q61382 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.54■□□□□ 0.08
Traf4Q61382 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Traf4Q61382 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.53■□□□□ 0.08
Traf4Q61382 Gm13158-201ENSMUST00000122007 736 ntBASIC15.53■□□□□ 0.08
Traf4Q61382 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Gm10698-201ENSMUST00000182663 604 ntBASIC15.53■□□□□ 0.08
Traf4Q61382 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Traf4Q61382 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.53■□□□□ 0.08
Traf4Q61382 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.53■□□□□ 0.08
Traf4Q61382 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Traf4Q61382 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Traf4Q61382 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Traf4Q61382 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.53■□□□□ 0.08
Traf4Q61382 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms