Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Gm7889-201ENSMUST00000185591 958 ntBASIC18.03■□□□□ 0.48
Slc6a4Q60857 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc6a4Q60857 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a4Q60857 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Slc6a4Q60857 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a4Q60857 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Slc6a4Q60857 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a4Q60857 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc6a4Q60857 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a4Q60857 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a4Q60857 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a4Q60857 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a4Q60857 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a4Q60857 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.01■□□□□ 0.47
Slc6a4Q60857 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.01■□□□□ 0.47
Slc6a4Q60857 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.01■□□□□ 0.47
Slc6a4Q60857 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a4Q60857 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Slc6a4Q60857 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18■□□□□ 0.47
Slc6a4Q60857 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a4Q60857 Gm10231-201ENSMUST00000181584 441 ntBASIC18■□□□□ 0.47
Slc6a4Q60857 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Gm10175-202ENSMUST00000208752 441 ntBASIC18■□□□□ 0.47
Slc6a4Q60857 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Slc6a4Q60857 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Slc6a4Q60857 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Slc6a4Q60857 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a4Q60857 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.99■□□□□ 0.47
Slc6a4Q60857 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.99■□□□□ 0.47
Slc6a4Q60857 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a4Q60857 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Gm7977-201ENSMUST00000193787 748 ntBASIC17.98■□□□□ 0.47
Slc6a4Q60857 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a4Q60857 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.98■□□□□ 0.47
Slc6a4Q60857 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a4Q60857 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms