Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ripk1Q60855 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.59■□□□□ 0.25
Ripk1Q60855 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ripk1Q60855 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ripk1Q60855 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ripk1Q60855 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ripk1Q60855 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ripk1Q60855 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ripk1Q60855 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.58■□□□□ 0.25
Ripk1Q60855 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.58■□□□□ 0.24
Ripk1Q60855 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.58■□□□□ 0.24
Ripk1Q60855 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Dio3-201ENSMUST00000097228 1449 ntBASIC16.58■□□□□ 0.24
Ripk1Q60855 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.58■□□□□ 0.24
Ripk1Q60855 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ripk1Q60855 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ripk1Q60855 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ripk1Q60855 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ripk1Q60855 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.57■□□□□ 0.24
Ripk1Q60855 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ripk1Q60855 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.56■□□□□ 0.24
Ripk1Q60855 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.56■□□□□ 0.24
Ripk1Q60855 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.56■□□□□ 0.24
Ripk1Q60855 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Ripk1Q60855 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Idnk-204ENSMUST00000226010 1898 ntBASIC16.56■□□□□ 0.24
Ripk1Q60855 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ripk1Q60855 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.55■□□□□ 0.24
Ripk1Q60855 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ripk1Q60855 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.55■□□□□ 0.24
Ripk1Q60855 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ripk1Q60855 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ripk1Q60855 Gm12896-201ENSMUST00000118430 226 ntBASIC16.55■□□□□ 0.24
Ripk1Q60855 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ripk1Q60855 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ripk1Q60855 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ripk1Q60855 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ripk1Q60855 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ripk1Q60855 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ripk1Q60855 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.54■□□□□ 0.24
Ripk1Q60855 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ripk1Q60855 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.54■□□□□ 0.24
Ripk1Q60855 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ripk1Q60855 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ripk1Q60855 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.53■□□□□ 0.24
Ripk1Q60855 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms