Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Reep4-203ENSMUST00000226563 1444 ntBASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-1Q5R1H8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Gm8969-201ENSMUST00000199694 526 ntBASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.41□□□□□ -0.1
Trav8d-1Q5R1H8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 AV356131-201ENSMUST00000206201 750 ntBASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8d-1Q5R1H8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Gm7860-201ENSMUST00000121190 879 ntBASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Gm10033-202ENSMUST00000211874 928 ntBASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8d-1Q5R1H8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms