Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.54□□□□□ -0.72
Herc2Q4U2R1 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Gm9731-201ENSMUST00000209480 747 ntBASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Gm24841-201ENSMUST00000158676 357 ntBASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC10.53□□□□□ -0.72
Herc2Q4U2R1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Herc2Q4U2R1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.52□□□□□ -0.72
Herc2Q4U2R1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC10.52□□□□□ -0.72
Herc2Q4U2R1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Herc2Q4U2R1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.52□□□□□ -0.72
Herc2Q4U2R1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.52□□□□□ -0.72
Herc2Q4U2R1 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.52□□□□□ -0.72
Herc2Q4U2R1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Herc2Q4U2R1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Mir3113-201ENSMUST00000175478 76 ntBASIC10.51□□□□□ -0.73
Herc2Q4U2R1 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Gm8396-201ENSMUST00000057361 823 ntBASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Herc2Q4U2R1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Gm44872-201ENSMUST00000207864 420 ntBASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Herc2Q4U2R1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms