Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Gm20760-201ENSMUST00000179197 648 ntBASIC18.68■□□□□ 0.58
Syne3Q4FZC9 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Gm11927-201ENSMUST00000118472 759 ntBASIC18.67■□□□□ 0.58
Syne3Q4FZC9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syne3Q4FZC9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Gm37856-201ENSMUST00000191634 999 ntBASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Gm38285-201ENSMUST00000192928 922 ntBASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syne3Q4FZC9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Gm27275-201ENSMUST00000184318 272 ntBASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syne3Q4FZC9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syne3Q4FZC9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syne3Q4FZC9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syne3Q4FZC9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syne3Q4FZC9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syne3Q4FZC9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Syne3Q4FZC9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syne3Q4FZC9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syne3Q4FZC9 Gm11249-201ENSMUST00000117071 859 ntBASIC18.62■□□□□ 0.57
Syne3Q4FZC9 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.62■□□□□ 0.57
Syne3Q4FZC9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Syne3Q4FZC9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms