Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa3Q3UPR0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shisa3Q3UPR0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Gm13534-201ENSMUST00000121169 513 ntBASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.14■□□□□ 0.01
Shisa3Q3UPR0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Gm37179-201ENSMUST00000194862 823 ntBASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms