Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Gm7889-201ENSMUST00000185591 958 ntBASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Gm29791-202ENSMUST00000207888 369 ntBASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Naf1Q3UMQ8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Gm38027-201ENSMUST00000192315 235 ntBASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Naf1Q3UMQ8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Naf1Q3UMQ8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Naf1Q3UMQ8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Naf1Q3UMQ8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Gm10418-201ENSMUST00000100943 576 ntBASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Naf1Q3UMQ8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms