Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Gm7638-201ENSMUST00000121348 967 ntBASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6aQ3UHK8 Grk6-206ENSMUST00000224995 2971 ntBASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6aQ3UHK8 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Gm24841-201ENSMUST00000158676 357 ntBASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6aQ3UHK8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnrc6aQ3UHK8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnrc6aQ3UHK8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnrc6aQ3UHK8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Tnrc6aQ3UHK8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Tnrc6aQ3UHK8 Gm29791-202ENSMUST00000207888 369 ntBASIC16.27■□□□□ 0.19
Tnrc6aQ3UHK8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnrc6aQ3UHK8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnrc6aQ3UHK8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Tnrc6aQ3UHK8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms