Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Gm15565-201ENSMUST00000118890 427 ntBASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Odf3b-204ENSMUST00000227834 930 ntBASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shcbp1lQ3TTP0 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Gm10418-201ENSMUST00000100943 576 ntBASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shcbp1lQ3TTP0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Gm13836-201ENSMUST00000121159 501 ntBASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.71■□□□□ 0.43
Shcbp1lQ3TTP0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Shcbp1lQ3TTP0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shcbp1lQ3TTP0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shcbp1lQ3TTP0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms