Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.2■□□□□ 0.18
Cacna1aP97445 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Gm24589-201ENSMUST00000116692 94 ntBASIC16.19■□□□□ 0.18
Cacna1aP97445 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.19■□□□□ 0.18
Cacna1aP97445 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cacna1aP97445 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cacna1aP97445 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cacna1aP97445 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.19■□□□□ 0.18
Cacna1aP97445 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.19■□□□□ 0.18
Cacna1aP97445 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cacna1aP97445 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1aP97445 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Gm27525-201ENSMUST00000184465 107 ntBASIC16.18■□□□□ 0.18
Cacna1aP97445 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.18■□□□□ 0.18
Cacna1aP97445 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1aP97445 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.18■□□□□ 0.18
Cacna1aP97445 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.18■□□□□ 0.18
Cacna1aP97445 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.17■□□□□ 0.18
Cacna1aP97445 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1aP97445 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
Cacna1aP97445 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1aP97445 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1aP97445 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Cacna1aP97445 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.15■□□□□ 0.18
Cacna1aP97445 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Gm18115-201ENSMUST00000221209 621 ntBASIC16.15■□□□□ 0.18
Cacna1aP97445 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cacna1aP97445 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cacna1aP97445 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cacna1aP97445 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Cacna1aP97445 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1aP97445 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cacna1aP97445 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.14■□□□□ 0.17
Cacna1aP97445 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.14■□□□□ 0.17
Cacna1aP97445 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Gm6623-201ENSMUST00000173570 544 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms