Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm5P62322 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm5P62322 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm5P62322 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm5P62322 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Lsm5P62322 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm5P62322 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm5P62322 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.71□□□□□ -0.05
Lsm5P62322 Gm27801-201ENSMUST00000184174 223 ntBASIC14.71□□□□□ -0.05
Lsm5P62322 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm5P62322 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm5P62322 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm5P62322 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm5P62322 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm5P62322 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm5P62322 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Lsm5P62322 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm5P62322 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm5P62322 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Gm15546-201ENSMUST00000122095 826 ntBASIC14.7□□□□□ -0.06
Lsm5P62322 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.7□□□□□ -0.06
Lsm5P62322 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Lsm5P62322 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lsm5P62322 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm5P62322 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lsm5P62322 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Lsm5P62322 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lsm5P62322 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Gm5812-201ENSMUST00000061073 957 ntBASIC14.69□□□□□ -0.06
Lsm5P62322 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm5P62322 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm5P62322 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lsm5P62322 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm5P62322 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm5P62322 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm5P62322 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lsm5P62322 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.68□□□□□ -0.06
Lsm5P62322 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lsm5P62322 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lsm5P62322 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lsm5P62322 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm5P62322 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lsm5P62322 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm5P62322 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm5P62322 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm5P62322 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm5P62322 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm5P62322 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm5P62322 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm5P62322 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms