Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.24□□□□□ -0.13
Sssca1P56873 Idnk-204ENSMUST00000226010 1898 ntBASIC14.24□□□□□ -0.13
Sssca1P56873 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sssca1P56873 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Sssca1P56873 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sssca1P56873 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.23□□□□□ -0.13
Sssca1P56873 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.23□□□□□ -0.13
Sssca1P56873 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sssca1P56873 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.23□□□□□ -0.13
Sssca1P56873 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.23□□□□□ -0.13
Sssca1P56873 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sssca1P56873 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sssca1P56873 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sssca1P56873 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.22□□□□□ -0.13
Sssca1P56873 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.22□□□□□ -0.13
Sssca1P56873 Gm42778-201ENSMUST00000199644 553 ntBASIC14.22□□□□□ -0.13
Sssca1P56873 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.22□□□□□ -0.13
Sssca1P56873 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sssca1P56873 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.22□□□□□ -0.13
Sssca1P56873 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sssca1P56873 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sssca1P56873 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sssca1P56873 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Sssca1P56873 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.21□□□□□ -0.13
Sssca1P56873 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sssca1P56873 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Sssca1P56873 Gm6420-201ENSMUST00000193885 723 ntBASIC14.21□□□□□ -0.13
Sssca1P56873 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Sssca1P56873 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sssca1P56873 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sssca1P56873 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sssca1P56873 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sssca1P56873 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sssca1P56873 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.21□□□□□ -0.14
Sssca1P56873 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Sssca1P56873 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.2□□□□□ -0.14
Sssca1P56873 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.2□□□□□ -0.14
Sssca1P56873 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.2□□□□□ -0.14
Sssca1P56873 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sssca1P56873 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.2□□□□□ -0.14
Sssca1P56873 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.2□□□□□ -0.14
Sssca1P56873 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms