Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.72□□□□□ -0.05
Cks2P56390 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cks2P56390 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Cks2P56390 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.72□□□□□ -0.05
Cks2P56390 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cks2P56390 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks2P56390 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cks2P56390 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.71□□□□□ -0.05
Cks2P56390 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cks2P56390 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.71□□□□□ -0.05
Cks2P56390 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.71□□□□□ -0.05
Cks2P56390 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cks2P56390 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.71□□□□□ -0.05
Cks2P56390 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks2P56390 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cks2P56390 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cks2P56390 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.71□□□□□ -0.06
Cks2P56390 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cks2P56390 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cks2P56390 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks2P56390 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cks2P56390 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks2P56390 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cks2P56390 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.7□□□□□ -0.06
Cks2P56390 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks2P56390 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks2P56390 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks2P56390 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.7□□□□□ -0.06
Cks2P56390 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks2P56390 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Cks2P56390 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks2P56390 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.69□□□□□ -0.06
Cks2P56390 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks2P56390 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cks2P56390 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.69□□□□□ -0.06
Cks2P56390 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.69□□□□□ -0.06
Cks2P56390 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks2P56390 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks2P56390 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks2P56390 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks2P56390 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.68□□□□□ -0.06
Cks2P56390 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.68□□□□□ -0.06
Cks2P56390 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cks2P56390 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.68□□□□□ -0.06
Cks2P56390 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cks2P56390 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.68□□□□□ -0.06
Cks2P56390 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cks2P56390 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks2P56390 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cks2P56390 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cks2P56390 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cks2P56390 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms