Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atxn1P54254 Gm12085-201ENSMUST00000119263 940 ntBASIC17.43■□□□□ 0.38
Atxn1P54254 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.43■□□□□ 0.38
Atxn1P54254 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.43■□□□□ 0.38
Atxn1P54254 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Atxn1P54254 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atxn1P54254 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Atxn1P54254 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Atxn1P54254 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.43■□□□□ 0.38
Atxn1P54254 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atxn1P54254 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.42■□□□□ 0.38
Atxn1P54254 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.42■□□□□ 0.38
Atxn1P54254 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.42■□□□□ 0.38
Atxn1P54254 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.42■□□□□ 0.38
Atxn1P54254 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.42■□□□□ 0.38
Atxn1P54254 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Atxn1P54254 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Atxn1P54254 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.42■□□□□ 0.38
Atxn1P54254 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.42■□□□□ 0.38
Atxn1P54254 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atxn1P54254 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Atxn1P54254 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.41■□□□□ 0.38
Atxn1P54254 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.41■□□□□ 0.38
Atxn1P54254 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.41■□□□□ 0.38
Atxn1P54254 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.41■□□□□ 0.38
Atxn1P54254 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.41■□□□□ 0.38
Atxn1P54254 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Atxn1P54254 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atxn1P54254 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Atxn1P54254 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atxn1P54254 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atxn1P54254 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.4■□□□□ 0.38
Atxn1P54254 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Atxn1P54254 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atxn1P54254 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atxn1P54254 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Atxn1P54254 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atxn1P54254 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atxn1P54254 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.4■□□□□ 0.38
Atxn1P54254 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atxn1P54254 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atxn1P54254 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atxn1P54254 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Atxn1P54254 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Atxn1P54254 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atxn1P54254 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.39■□□□□ 0.37
Atxn1P54254 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Mir6349-201ENSMUST00000184059 97 ntBASIC17.39■□□□□ 0.37
Atxn1P54254 Gm43514-201ENSMUST00000198852 424 ntBASIC17.39■□□□□ 0.37
Atxn1P54254 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Atxn1P54254 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.39■□□□□ 0.37
Atxn1P54254 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Atxn1P54254 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atxn1P54254 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.38■□□□□ 0.37
Atxn1P54254 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms