Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.56■□□□□ 0.4
Fdft1P53798 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.56■□□□□ 0.4
Fdft1P53798 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.56■□□□□ 0.4
Fdft1P53798 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.56■□□□□ 0.4
Fdft1P53798 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.56■□□□□ 0.4
Fdft1P53798 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Fdft1P53798 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fdft1P53798 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Fdft1P53798 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.55■□□□□ 0.4
Fdft1P53798 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Fdft1P53798 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.55■□□□□ 0.4
Fdft1P53798 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fdft1P53798 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Fdft1P53798 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Gm38285-201ENSMUST00000192928 922 ntBASIC17.54■□□□□ 0.4
Fdft1P53798 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Fdft1P53798 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.54■□□□□ 0.4
Fdft1P53798 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Fdft1P53798 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fdft1P53798 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.53■□□□□ 0.4
Fdft1P53798 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fdft1P53798 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Fdft1P53798 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
Fdft1P53798 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Fdft1P53798 Flg-201ENSMUST00000050758 1488 ntBASIC17.53■□□□□ 0.4
Fdft1P53798 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.53■□□□□ 0.4
Fdft1P53798 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.53■□□□□ 0.4
Fdft1P53798 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.53■□□□□ 0.4
Fdft1P53798 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Fdft1P53798 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fdft1P53798 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.53■□□□□ 0.4
Fdft1P53798 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.53■□□□□ 0.4
Fdft1P53798 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fdft1P53798 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fdft1P53798 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.52■□□□□ 0.4
Fdft1P53798 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fdft1P53798 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Fdft1P53798 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fdft1P53798 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fdft1P53798 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fdft1P53798 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Fdft1P53798 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fdft1P53798 Zfp783-201ENSMUST00000095946 670 ntBASIC17.52■□□□□ 0.4
Fdft1P53798 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fdft1P53798 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.52■□□□□ 0.39
Fdft1P53798 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fdft1P53798 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.52■□□□□ 0.39
Fdft1P53798 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fdft1P53798 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Fdft1P53798 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Fdft1P53798 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fdft1P53798 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Fdft1P53798 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.51■□□□□ 0.39
Fdft1P53798 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.51■□□□□ 0.39
Fdft1P53798 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.51■□□□□ 0.39
Fdft1P53798 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fdft1P53798 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms