Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.62■□□□□ 0.25
RoraP51448 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RoraP51448 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.62■□□□□ 0.25
RoraP51448 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RoraP51448 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RoraP51448 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RoraP51448 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RoraP51448 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RoraP51448 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.61■□□□□ 0.25
RoraP51448 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.61■□□□□ 0.25
RoraP51448 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RoraP51448 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RoraP51448 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RoraP51448 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RoraP51448 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RoraP51448 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RoraP51448 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RoraP51448 Gm13559-201ENSMUST00000120476 863 ntBASIC16.6■□□□□ 0.25
RoraP51448 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.6■□□□□ 0.25
RoraP51448 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.6■□□□□ 0.25
RoraP51448 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.6■□□□□ 0.25
RoraP51448 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RoraP51448 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.6■□□□□ 0.25
RoraP51448 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RoraP51448 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.59■□□□□ 0.25
RoraP51448 Gm11539-201ENSMUST00000119837 557 ntBASIC16.59■□□□□ 0.25
RoraP51448 Gm13436-201ENSMUST00000120418 567 ntBASIC16.59■□□□□ 0.25
RoraP51448 Gm10231-201ENSMUST00000181584 441 ntBASIC16.59■□□□□ 0.25
RoraP51448 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Gm10175-202ENSMUST00000208752 441 ntBASIC16.59■□□□□ 0.25
RoraP51448 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.59■□□□□ 0.25
RoraP51448 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RoraP51448 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RoraP51448 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RoraP51448 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RoraP51448 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RoraP51448 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RoraP51448 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RoraP51448 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RoraP51448 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RoraP51448 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.58■□□□□ 0.24
RoraP51448 Gm10517-202ENSMUST00000192970 758 ntBASIC16.58■□□□□ 0.24
RoraP51448 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.58■□□□□ 0.24
RoraP51448 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.58■□□□□ 0.24
RoraP51448 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.58■□□□□ 0.24
RoraP51448 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RoraP51448 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RoraP51448 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RoraP51448 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RoraP51448 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.58■□□□□ 0.24
RoraP51448 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RoraP51448 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RoraP51448 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RoraP51448 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RoraP51448 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RoraP51448 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.57■□□□□ 0.24
RoraP51448 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.57■□□□□ 0.24
RoraP51448 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RoraP51448 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RoraP51448 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms