Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Xcl1P47993 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.54□□□□□ -0.56
Xcl1P47993 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Xcl1P47993 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Gm7143-201ENSMUST00000222811 859 ntBASIC11.54□□□□□ -0.56
Xcl1P47993 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Xcl1P47993 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Xcl1P47993 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Xcl1P47993 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Xcl1P47993 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.53□□□□□ -0.56
Xcl1P47993 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Xcl1P47993 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Xcl1P47993 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Xcl1P47993 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Xcl1P47993 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Xcl1P47993 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.53□□□□□ -0.56
Xcl1P47993 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Xcl1P47993 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Xcl1P47993 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Xcl1P47993 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Xcl1P47993 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Xcl1P47993 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Xcl1P47993 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.52□□□□□ -0.56
Xcl1P47993 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Xcl1P47993 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Xcl1P47993 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC11.52□□□□□ -0.57
Xcl1P47993 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Xcl1P47993 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.52□□□□□ -0.57
Xcl1P47993 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Xcl1P47993 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.51□□□□□ -0.57
Xcl1P47993 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.51□□□□□ -0.57
Xcl1P47993 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Xcl1P47993 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Xcl1P47993 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Xcl1P47993 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Xcl1P47993 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Xcl1P47993 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC11.51□□□□□ -0.57
Xcl1P47993 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Xcl1P47993 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms