Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.25■□□□□ 0.67
Rpl13P47963 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Gm11643-201ENSMUST00000119578 864 ntBASIC19.25■□□□□ 0.67
Rpl13P47963 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.25■□□□□ 0.67
Rpl13P47963 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpl13P47963 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13P47963 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.24■□□□□ 0.67
Rpl13P47963 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rpl13P47963 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Gm27275-201ENSMUST00000184318 272 ntBASIC19.24■□□□□ 0.67
Rpl13P47963 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rpl13P47963 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13P47963 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rpl13P47963 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.23■□□□□ 0.67
Rpl13P47963 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpl13P47963 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpl13P47963 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13P47963 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.23■□□□□ 0.67
Rpl13P47963 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rpl13P47963 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rpl13P47963 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.22■□□□□ 0.67
Rpl13P47963 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.22■□□□□ 0.67
Rpl13P47963 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rpl13P47963 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.22■□□□□ 0.67
Rpl13P47963 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpl13P47963 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rpl13P47963 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rpl13P47963 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl13P47963 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Rpl13P47963 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.22■□□□□ 0.67
Rpl13P47963 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rpl13P47963 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Rpl13P47963 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rpl13P47963 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpl13P47963 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl13P47963 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Rpl13P47963 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.2■□□□□ 0.66
Rpl13P47963 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13P47963 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rpl13P47963 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13P47963 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpl13P47963 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13P47963 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rpl13P47963 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13P47963 Gm18666-201ENSMUST00000190039 958 ntBASIC19.2■□□□□ 0.66
Rpl13P47963 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13P47963 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rpl13P47963 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rpl13P47963 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpl13P47963 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms