Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.9■□□□□ 0.62
HttP42859 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HttP42859 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HttP42859 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HttP42859 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HttP42859 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HttP42859 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HttP42859 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.9■□□□□ 0.62
HttP42859 Mir5126-201ENSMUST00000175513 77 ntBASIC18.9■□□□□ 0.62
HttP42859 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.9■□□□□ 0.62
HttP42859 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HttP42859 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.89■□□□□ 0.62
HttP42859 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HttP42859 Mir5131-201ENSMUST00000175426 93 ntBASIC18.89■□□□□ 0.62
HttP42859 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HttP42859 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HttP42859 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.89■□□□□ 0.61
HttP42859 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.89■□□□□ 0.61
HttP42859 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HttP42859 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HttP42859 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.88■□□□□ 0.61
HttP42859 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
HttP42859 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HttP42859 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HttP42859 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HttP42859 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.88■□□□□ 0.61
HttP42859 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.88■□□□□ 0.61
HttP42859 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HttP42859 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.88■□□□□ 0.61
HttP42859 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HttP42859 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HttP42859 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.88■□□□□ 0.61
HttP42859 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
HttP42859 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HttP42859 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HttP42859 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HttP42859 Gm11779-201ENSMUST00000118541 368 ntBASIC18.87■□□□□ 0.61
HttP42859 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HttP42859 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HttP42859 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.87■□□□□ 0.61
HttP42859 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HttP42859 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HttP42859 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HttP42859 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HttP42859 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Gm15372-201ENSMUST00000120729 834 ntBASIC18.86■□□□□ 0.61
HttP42859 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.86■□□□□ 0.61
HttP42859 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.86■□□□□ 0.61
HttP42859 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.86■□□□□ 0.61
HttP42859 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.86■□□□□ 0.61
HttP42859 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.86■□□□□ 0.61
HttP42859 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HttP42859 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.85■□□□□ 0.61
HttP42859 Gm2756-201ENSMUST00000195851 400 ntBASIC18.85■□□□□ 0.61
HttP42859 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HttP42859 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HttP42859 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.85■□□□□ 0.61
HttP42859 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HttP42859 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HttP42859 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
HttP42859 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.85■□□□□ 0.61
HttP42859 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HttP42859 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HttP42859 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HttP42859 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.84■□□□□ 0.61
HttP42859 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HttP42859 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HttP42859 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.84■□□□□ 0.61
HttP42859 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms