Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nedd8P29595 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nedd8P29595 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nedd8P29595 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Nedd8P29595 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.32■□□□□ 0.2
Nedd8P29595 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nedd8P29595 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.32■□□□□ 0.2
Nedd8P29595 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Nedd8P29595 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.31■□□□□ 0.2
Nedd8P29595 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nedd8P29595 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nedd8P29595 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.31■□□□□ 0.2
Nedd8P29595 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.31■□□□□ 0.2
Nedd8P29595 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.31■□□□□ 0.2
Nedd8P29595 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nedd8P29595 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nedd8P29595 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nedd8P29595 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.3■□□□□ 0.2
Nedd8P29595 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nedd8P29595 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nedd8P29595 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Nedd8P29595 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.29■□□□□ 0.2
Nedd8P29595 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nedd8P29595 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.29■□□□□ 0.2
Nedd8P29595 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.29■□□□□ 0.2
Nedd8P29595 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.29■□□□□ 0.2
Nedd8P29595 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.29■□□□□ 0.2
Nedd8P29595 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nedd8P29595 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.28■□□□□ 0.2
Nedd8P29595 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.28■□□□□ 0.2
Nedd8P29595 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nedd8P29595 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.28■□□□□ 0.2
Nedd8P29595 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nedd8P29595 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nedd8P29595 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nedd8P29595 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.28■□□□□ 0.2
Nedd8P29595 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms