Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Col8a2P25318 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col8a2P25318 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col8a2P25318 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Gm21814-202ENSMUST00000203277 873 ntBASIC14.69□□□□□ -0.06
Col8a2P25318 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Gm3375-201ENSMUST00000203929 796 ntBASIC14.69□□□□□ -0.06
Col8a2P25318 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.69□□□□□ -0.06
Col8a2P25318 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.69□□□□□ -0.06
Col8a2P25318 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col8a2P25318 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col8a2P25318 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Col8a2P25318 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col8a2P25318 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col8a2P25318 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.68□□□□□ -0.06
Col8a2P25318 Gm11539-201ENSMUST00000119837 557 ntBASIC14.68□□□□□ -0.06
Col8a2P25318 Gm13436-201ENSMUST00000120418 567 ntBASIC14.68□□□□□ -0.06
Col8a2P25318 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.68□□□□□ -0.06
Col8a2P25318 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Gm9987-201ENSMUST00000069768 567 ntBASIC14.68□□□□□ -0.06
Col8a2P25318 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.68□□□□□ -0.06
Col8a2P25318 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col8a2P25318 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.67□□□□□ -0.06
Col8a2P25318 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col8a2P25318 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Gm29791-202ENSMUST00000207888 369 ntBASIC14.67□□□□□ -0.06
Col8a2P25318 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.67□□□□□ -0.06
Col8a2P25318 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col8a2P25318 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.67□□□□□ -0.06
Col8a2P25318 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col8a2P25318 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Col8a2P25318 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col8a2P25318 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col8a2P25318 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.66□□□□□ -0.06
Col8a2P25318 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.66□□□□□ -0.06
Col8a2P25318 Gm30025-201ENSMUST00000218555 728 ntBASIC14.66□□□□□ -0.06
Col8a2P25318 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col8a2P25318 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.65□□□□□ -0.06
Col8a2P25318 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms