Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clk1P22518 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Clk1P22518 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk1P22518 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk1P22518 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clk1P22518 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clk1P22518 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.33■□□□□ 0.21
Clk1P22518 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clk1P22518 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clk1P22518 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk1P22518 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clk1P22518 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.33■□□□□ 0.2
Clk1P22518 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.33■□□□□ 0.2
Clk1P22518 Gm2559-201ENSMUST00000201323 363 ntBASIC16.33■□□□□ 0.2
Clk1P22518 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Clk1P22518 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.33■□□□□ 0.2
Clk1P22518 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk1P22518 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk1P22518 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk1P22518 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.32■□□□□ 0.2
Clk1P22518 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.32■□□□□ 0.2
Clk1P22518 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.32■□□□□ 0.2
Clk1P22518 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clk1P22518 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk1P22518 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Clk1P22518 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.31■□□□□ 0.2
Clk1P22518 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.31■□□□□ 0.2
Clk1P22518 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clk1P22518 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clk1P22518 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clk1P22518 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clk1P22518 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.3■□□□□ 0.2
Clk1P22518 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.3■□□□□ 0.2
Clk1P22518 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.3■□□□□ 0.2
Clk1P22518 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clk1P22518 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk1P22518 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.29■□□□□ 0.2
Clk1P22518 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.29■□□□□ 0.2
Clk1P22518 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.29■□□□□ 0.2
Clk1P22518 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.29■□□□□ 0.2
Clk1P22518 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.29■□□□□ 0.2
Clk1P22518 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.29■□□□□ 0.2
Clk1P22518 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.29■□□□□ 0.2
Clk1P22518 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clk1P22518 Dio3-201ENSMUST00000097228 1449 ntBASIC16.28■□□□□ 0.2
Clk1P22518 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clk1P22518 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk1P22518 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk1P22518 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms