Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cntn1P12960 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cntn1P12960 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.86■□□□□ 0.29
Cntn1P12960 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cntn1P12960 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cntn1P12960 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cntn1P12960 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cntn1P12960 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cntn1P12960 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.85■□□□□ 0.29
Cntn1P12960 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.85■□□□□ 0.29
Cntn1P12960 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.85■□□□□ 0.29
Cntn1P12960 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cntn1P12960 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cntn1P12960 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cntn1P12960 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Gm13401-201ENSMUST00000117074 291 ntBASIC16.84■□□□□ 0.29
Cntn1P12960 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.84■□□□□ 0.29
Cntn1P12960 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cntn1P12960 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.84■□□□□ 0.29
Cntn1P12960 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cntn1P12960 Odf3b-204ENSMUST00000227834 930 ntBASIC16.84■□□□□ 0.29
Cntn1P12960 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.84■□□□□ 0.29
Cntn1P12960 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cntn1P12960 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
Cntn1P12960 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cntn1P12960 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cntn1P12960 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cntn1P12960 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cntn1P12960 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cntn1P12960 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cntn1P12960 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cntn1P12960 Gm12085-201ENSMUST00000119263 940 ntBASIC16.83■□□□□ 0.28
Cntn1P12960 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Cntn1P12960 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.83■□□□□ 0.28
Cntn1P12960 Gm3375-201ENSMUST00000203929 796 ntBASIC16.83■□□□□ 0.28
Cntn1P12960 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.83■□□□□ 0.28
Cntn1P12960 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.83■□□□□ 0.28
Cntn1P12960 Gm29791-202ENSMUST00000207888 369 ntBASIC16.83■□□□□ 0.28
Cntn1P12960 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.83■□□□□ 0.28
Cntn1P12960 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cntn1P12960 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.82■□□□□ 0.28
Cntn1P12960 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Gm10418-201ENSMUST00000100943 576 ntBASIC16.82■□□□□ 0.28
Cntn1P12960 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Gm30025-201ENSMUST00000218555 728 ntBASIC16.82■□□□□ 0.28
Cntn1P12960 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cntn1P12960 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms