Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Hoxc6P10629 Gm11355-201ENSMUST00000121120 306 ntBASIC19.55■□□□□ 0.72
Hoxc6P10629 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.55■□□□□ 0.72
Hoxc6P10629 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc6P10629 Gm18669-201ENSMUST00000216049 778 ntBASIC19.55■□□□□ 0.72
Hoxc6P10629 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxc6P10629 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc6P10629 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc6P10629 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc6P10629 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc6P10629 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hoxc6P10629 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxc6P10629 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc6P10629 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hoxc6P10629 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hoxc6P10629 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hoxc6P10629 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxc6P10629 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxc6P10629 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxc6P10629 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Hoxc6P10629 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxc6P10629 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.53■□□□□ 0.72
Hoxc6P10629 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxc6P10629 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Hoxc6P10629 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.53■□□□□ 0.72
Hoxc6P10629 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxc6P10629 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxc6P10629 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hoxc6P10629 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.52■□□□□ 0.72
Hoxc6P10629 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hoxc6P10629 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Hoxc6P10629 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc6P10629 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxc6P10629 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxc6P10629 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxc6P10629 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc6P10629 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc6P10629 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc6P10629 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hoxc6P10629 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.51■□□□□ 0.71
Hoxc6P10629 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxc6P10629 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc6P10629 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hoxc6P10629 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxc6P10629 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc6P10629 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxc6P10629 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc6P10629 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hoxc6P10629 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Hoxc6P10629 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Hoxc6P10629 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc6P10629 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.49■□□□□ 0.71
Hoxc6P10629 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxc6P10629 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Gm7153-201ENSMUST00000117092 455 ntBASIC19.49■□□□□ 0.71
Hoxc6P10629 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxc6P10629 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hoxc6P10629 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hoxc6P10629 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc6P10629 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxc6P10629 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc6P10629 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms