Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smim1P0C8K7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim1P0C8K7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smim1P0C8K7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smim1P0C8K7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smim1P0C8K7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.14□□□□□ -0.47
Smim1P0C8K7 Gm40881-201ENSMUST00000223397 166 ntBASIC12.14□□□□□ -0.47
Smim1P0C8K7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.14□□□□□ -0.47
Smim1P0C8K7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.14□□□□□ -0.47
Smim1P0C8K7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim1P0C8K7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Smim1P0C8K7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms