Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ApoeP08226 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.67■□□□□ 0.26
ApoeP08226 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ApoeP08226 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.67■□□□□ 0.26
ApoeP08226 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.66■□□□□ 0.26
ApoeP08226 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.66■□□□□ 0.26
ApoeP08226 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ApoeP08226 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.66■□□□□ 0.26
ApoeP08226 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.66■□□□□ 0.26
ApoeP08226 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
ApoeP08226 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ApoeP08226 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.65■□□□□ 0.26
ApoeP08226 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ApoeP08226 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ApoeP08226 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ApoeP08226 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.65■□□□□ 0.26
ApoeP08226 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ApoeP08226 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ApoeP08226 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ApoeP08226 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
ApoeP08226 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
ApoeP08226 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.64■□□□□ 0.25
ApoeP08226 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.64■□□□□ 0.25
ApoeP08226 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.64■□□□□ 0.25
ApoeP08226 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ApoeP08226 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Gm45417-201ENSMUST00000209533 758 ntBASIC16.63■□□□□ 0.25
ApoeP08226 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.63■□□□□ 0.25
ApoeP08226 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ApoeP08226 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ApoeP08226 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ApoeP08226 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ApoeP08226 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ApoeP08226 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ApoeP08226 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ApoeP08226 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ApoeP08226 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ApoeP08226 Gm13234-201ENSMUST00000120010 747 ntBASIC16.62■□□□□ 0.25
ApoeP08226 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ApoeP08226 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms