Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
P06320 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.15□□□□□ -0.62
P06320 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.15□□□□□ -0.62
P06320 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
P06320 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.15□□□□□ -0.62
P06320 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
P06320 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.15□□□□□ -0.62
P06320 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.15□□□□□ -0.62
P06320 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06320 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06320 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06320 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.15□□□□□ -0.63
P06320 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06320 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.15□□□□□ -0.63
P06320 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06320 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06320 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
P06320 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.14□□□□□ -0.63
P06320 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC11.14□□□□□ -0.63
P06320 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
P06320 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.14□□□□□ -0.63
P06320 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
P06320 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11.14□□□□□ -0.63
P06320 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
P06320 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.14□□□□□ -0.63
P06320 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC11.14□□□□□ -0.63
P06320 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.14□□□□□ -0.63
P06320 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
P06320 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06320 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
P06320 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P06320 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
P06320 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.13□□□□□ -0.63
P06320 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.13□□□□□ -0.63
P06320 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Golgb1-201ENSMUST00000023534 498 ntBASIC11.13□□□□□ -0.63
P06320 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P06320 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.13□□□□□ -0.63
P06320 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06320 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms