Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.78□□□□□ -0.04
Cd74P04441 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cd74P04441 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Cd74P04441 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cd74P04441 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.78□□□□□ -0.04
Cd74P04441 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.78□□□□□ -0.04
Cd74P04441 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.78□□□□□ -0.04
Cd74P04441 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.78□□□□□ -0.04
Cd74P04441 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cd74P04441 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd74P04441 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd74P04441 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cd74P04441 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.77□□□□□ -0.04
Cd74P04441 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd74P04441 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cd74P04441 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd74P04441 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd74P04441 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cd74P04441 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd74P04441 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd74P04441 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cd74P04441 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.77□□□□□ -0.05
Cd74P04441 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Cd74P04441 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.77□□□□□ -0.05
Cd74P04441 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.77□□□□□ -0.05
Cd74P04441 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd74P04441 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.76□□□□□ -0.05
Cd74P04441 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.76□□□□□ -0.05
Cd74P04441 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.76□□□□□ -0.05
Cd74P04441 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.76□□□□□ -0.05
Cd74P04441 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cd74P04441 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.76□□□□□ -0.05
Cd74P04441 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd74P04441 Dio3-201ENSMUST00000097228 1449 ntBASIC14.75□□□□□ -0.05
Cd74P04441 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.75□□□□□ -0.05
Cd74P04441 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.75□□□□□ -0.05
Cd74P04441 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Cd74P04441 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Gm18666-201ENSMUST00000190039 958 ntBASIC14.75□□□□□ -0.05
Cd74P04441 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cd74P04441 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd74P04441 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.75□□□□□ -0.05
Cd74P04441 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cd74P04441 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.74□□□□□ -0.05
Cd74P04441 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd74P04441 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.74□□□□□ -0.05
Cd74P04441 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.74□□□□□ -0.05
Cd74P04441 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms