Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P03980 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.61□□□□□ -0.23
P03980 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.61□□□□□ -0.23
P03980 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.61□□□□□ -0.23
P03980 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
P03980 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
P03980 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
P03980 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P03980 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
P03980 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
P03980 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.6□□□□□ -0.23
P03980 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
P03980 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
P03980 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
P03980 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.6□□□□□ -0.23
P03980 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
P03980 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
P03980 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P03980 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
P03980 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.59□□□□□ -0.23
P03980 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.59□□□□□ -0.23
P03980 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
P03980 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.59□□□□□ -0.23
P03980 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.59□□□□□ -0.23
P03980 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.59□□□□□ -0.23
P03980 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P03980 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
P03980 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
P03980 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
P03980 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.58□□□□□ -0.24
P03980 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
P03980 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
P03980 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.58□□□□□ -0.24
P03980 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
P03980 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
P03980 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.58□□□□□ -0.24
P03980 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P03980 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms