Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01804 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01804 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01804 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01804 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01804 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01804 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01804 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.18■□□□□ 0.02
P01804 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.18■□□□□ 0.02
P01804 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
P01804 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
P01804 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01804 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.17■□□□□ 0.02
P01804 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
P01804 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
P01804 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.17■□□□□ 0.02
P01804 Gm37292-201ENSMUST00000192062 758 ntBASIC15.17■□□□□ 0.02
P01804 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
P01804 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
P01804 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01804 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
P01804 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
P01804 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
P01804 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.16■□□□□ 0.02
P01804 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Gm6576-201ENSMUST00000169678 883 ntBASIC15.16■□□□□ 0.02
P01804 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.16■□□□□ 0.02
P01804 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
P01804 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01804 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P01804 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
P01804 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.15■□□□□ 0.02
P01804 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
P01804 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.15■□□□□ 0.02
P01804 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P01804 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
P01804 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P01804 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01804 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01804 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01804 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.14■□□□□ 0.01
P01804 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01804 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms