Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Syn1O88935 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Syn1O88935 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Syn1O88935 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Syn1O88935 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.06■□□□□ 0.48
Syn1O88935 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.06■□□□□ 0.48
Syn1O88935 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Gm27525-201ENSMUST00000184465 107 ntBASIC18.06■□□□□ 0.48
Syn1O88935 Gm27459-201ENSMUST00000184860 107 ntBASIC18.06■□□□□ 0.48
Syn1O88935 Gm43347-201ENSMUST00000200226 580 ntBASIC18.06■□□□□ 0.48
Syn1O88935 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.06■□□□□ 0.48
Syn1O88935 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.06■□□□□ 0.48
Syn1O88935 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Syn1O88935 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syn1O88935 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.05■□□□□ 0.48
Syn1O88935 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Syn1O88935 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Syn1O88935 Gm11452-201ENSMUST00000122376 690 ntBASIC18.05■□□□□ 0.48
Syn1O88935 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syn1O88935 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Syn1O88935 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.05■□□□□ 0.48
Syn1O88935 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.04■□□□□ 0.48
Syn1O88935 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.04■□□□□ 0.48
Syn1O88935 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.04■□□□□ 0.48
Syn1O88935 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syn1O88935 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Syn1O88935 BC021767-201ENSMUST00000126387 1716 ntBASIC18.03■□□□□ 0.48
Syn1O88935 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Syn1O88935 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.03■□□□□ 0.48
Syn1O88935 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Syn1O88935 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syn1O88935 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Mir770-201ENSMUST00000103252 94 ntBASIC18.02■□□□□ 0.48
Syn1O88935 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Gm26039-201ENSMUST00000158152 144 ntBASIC18.02■□□□□ 0.48
Syn1O88935 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Syn1O88935 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Syn1O88935 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Syn1O88935 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Syn1O88935 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Syn1O88935 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Syn1O88935 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Syn1O88935 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.01■□□□□ 0.47
Syn1O88935 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.01■□□□□ 0.47
Syn1O88935 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Syn1O88935 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Syn1O88935 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Syn1O88935 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms