Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm7977-201ENSMUST00000193787 748 ntBASIC16.93■□□□□ 0.3
Best1O88870 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.93■□□□□ 0.3
Best1O88870 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.93■□□□□ 0.3
Best1O88870 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Best1O88870 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.93■□□□□ 0.3
Best1O88870 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.92■□□□□ 0.3
Best1O88870 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Best1O88870 Gm18959-201ENSMUST00000208954 655 ntBASIC16.92■□□□□ 0.3
Best1O88870 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Best1O88870 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Best1O88870 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Best1O88870 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Best1O88870 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.92■□□□□ 0.3
Best1O88870 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Best1O88870 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Best1O88870 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Best1O88870 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.92■□□□□ 0.3
Best1O88870 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Best1O88870 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Best1O88870 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.91■□□□□ 0.3
Best1O88870 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Best1O88870 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.91■□□□□ 0.3
Best1O88870 Gm45058-201ENSMUST00000205810 766 ntBASIC16.91■□□□□ 0.3
Best1O88870 Gm7791-201ENSMUST00000219066 539 ntBASIC16.91■□□□□ 0.3
Best1O88870 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.91■□□□□ 0.3
Best1O88870 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Best1O88870 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Best1O88870 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Best1O88870 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Best1O88870 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Best1O88870 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.9■□□□□ 0.3
Best1O88870 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Best1O88870 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.9■□□□□ 0.3
Best1O88870 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Best1O88870 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Best1O88870 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Best1O88870 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Best1O88870 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.89■□□□□ 0.29
Best1O88870 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Best1O88870 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Best1O88870 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.89■□□□□ 0.29
Best1O88870 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.89■□□□□ 0.29
Best1O88870 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Best1O88870 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Best1O88870 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
Best1O88870 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Best1O88870 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Best1O88870 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.88■□□□□ 0.29
Best1O88870 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Best1O88870 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.88■□□□□ 0.29
Best1O88870 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Best1O88870 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms