Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShdO88834 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShdO88834 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.96■□□□□ 0.47
ShdO88834 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ShdO88834 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.96■□□□□ 0.47
ShdO88834 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.96■□□□□ 0.47
ShdO88834 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ShdO88834 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShdO88834 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
ShdO88834 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.95■□□□□ 0.46
ShdO88834 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Gm10418-201ENSMUST00000100943 576 ntBASIC17.95■□□□□ 0.46
ShdO88834 Gm22240-201ENSMUST00000175225 82 ntBASIC17.95■□□□□ 0.46
ShdO88834 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.95■□□□□ 0.46
ShdO88834 Gm18025-201ENSMUST00000221733 862 ntBASIC17.95■□□□□ 0.46
ShdO88834 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ShdO88834 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.95■□□□□ 0.46
ShdO88834 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ShdO88834 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ShdO88834 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
ShdO88834 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.94■□□□□ 0.46
ShdO88834 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.94■□□□□ 0.46
ShdO88834 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ShdO88834 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.94■□□□□ 0.46
ShdO88834 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.94■□□□□ 0.46
ShdO88834 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShdO88834 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ShdO88834 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ShdO88834 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.93■□□□□ 0.46
ShdO88834 Mir8112-201ENSMUST00000184382 131 ntBASIC17.93■□□□□ 0.46
ShdO88834 Gm18666-201ENSMUST00000190039 958 ntBASIC17.93■□□□□ 0.46
ShdO88834 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.93■□□□□ 0.46
ShdO88834 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ShdO88834 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ShdO88834 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.93■□□□□ 0.46
ShdO88834 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShdO88834 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShdO88834 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
ShdO88834 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ShdO88834 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShdO88834 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShdO88834 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShdO88834 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShdO88834 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ShdO88834 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShdO88834 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ShdO88834 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ShdO88834 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShdO88834 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
ShdO88834 Gm5643-201ENSMUST00000117081 966 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms