Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Hcn1O88704 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.84■□□□□ 0.29
Hcn1O88704 Gm12896-201ENSMUST00000118430 226 ntBASIC16.84■□□□□ 0.29
Hcn1O88704 Gm22325-201ENSMUST00000158904 308 ntBASIC16.84■□□□□ 0.29
Hcn1O88704 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.84■□□□□ 0.29
Hcn1O88704 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.84■□□□□ 0.29
Hcn1O88704 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn1O88704 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.83■□□□□ 0.29
Hcn1O88704 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn1O88704 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.83■□□□□ 0.28
Hcn1O88704 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn1O88704 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn1O88704 Gm37856-201ENSMUST00000191634 999 ntBASIC16.83■□□□□ 0.28
Hcn1O88704 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn1O88704 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn1O88704 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn1O88704 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn1O88704 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.82■□□□□ 0.28
Hcn1O88704 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Gm20760-201ENSMUST00000179197 648 ntBASIC16.82■□□□□ 0.28
Hcn1O88704 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.82■□□□□ 0.28
Hcn1O88704 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hcn1O88704 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn1O88704 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hcn1O88704 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hcn1O88704 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.81■□□□□ 0.28
Hcn1O88704 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hcn1O88704 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.81■□□□□ 0.28
Hcn1O88704 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.81■□□□□ 0.28
Hcn1O88704 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Hcn1O88704 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Gm27275-201ENSMUST00000184318 272 ntBASIC16.81■□□□□ 0.28
Hcn1O88704 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.81■□□□□ 0.28
Hcn1O88704 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.81■□□□□ 0.28
Hcn1O88704 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hcn1O88704 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hcn1O88704 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn1O88704 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hcn1O88704 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.8■□□□□ 0.28
Hcn1O88704 Dio3-201ENSMUST00000097228 1449 ntBASIC16.8■□□□□ 0.28
Hcn1O88704 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.8■□□□□ 0.28
Hcn1O88704 Gm2399-201ENSMUST00000104944 225 ntBASIC16.8■□□□□ 0.28
Hcn1O88704 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.8■□□□□ 0.28
Hcn1O88704 Trmt13-210ENSMUST00000198454 880 ntBASIC16.8■□□□□ 0.28
Hcn1O88704 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.8■□□□□ 0.28
Hcn1O88704 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hcn1O88704 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hcn1O88704 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hcn1O88704 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hcn1O88704 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn1O88704 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.79■□□□□ 0.28
Hcn1O88704 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Hcn1O88704 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hcn1O88704 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms