Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ClppO88696 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClppO88696 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ClppO88696 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.09■□□□□ 0.33
ClppO88696 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ClppO88696 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.09■□□□□ 0.33
ClppO88696 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ClppO88696 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Dancr-204ENSMUST00000132389 2347 ntBASIC17.09■□□□□ 0.33
ClppO88696 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClppO88696 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ClppO88696 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ClppO88696 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ClppO88696 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ClppO88696 Gm11643-201ENSMUST00000119578 864 ntBASIC17.08■□□□□ 0.32
ClppO88696 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.08■□□□□ 0.32
ClppO88696 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ClppO88696 Gm18025-201ENSMUST00000221733 862 ntBASIC17.08■□□□□ 0.32
ClppO88696 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ClppO88696 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ClppO88696 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClppO88696 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.07■□□□□ 0.32
ClppO88696 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.07■□□□□ 0.32
ClppO88696 Mtag2-201ENSMUST00000058665 714 ntBASIC17.07■□□□□ 0.32
ClppO88696 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.07■□□□□ 0.32
ClppO88696 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ClppO88696 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClppO88696 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.07■□□□□ 0.32
ClppO88696 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ClppO88696 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.06■□□□□ 0.32
ClppO88696 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.06■□□□□ 0.32
ClppO88696 Gm43183-201ENSMUST00000200632 547 ntBASIC17.06■□□□□ 0.32
ClppO88696 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.06■□□□□ 0.32
ClppO88696 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClppO88696 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ClppO88696 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ClppO88696 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ClppO88696 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms