Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.13■□□□□ 0.81
Becn1O88597 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.13■□□□□ 0.81
Becn1O88597 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.13■□□□□ 0.81
Becn1O88597 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Becn1O88597 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Becn1O88597 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.12■□□□□ 0.81
Becn1O88597 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Becn1O88597 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Becn1O88597 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.12■□□□□ 0.81
Becn1O88597 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Becn1O88597 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Becn1O88597 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Becn1O88597 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Becn1O88597 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Becn1O88597 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Becn1O88597 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Becn1O88597 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Becn1O88597 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Becn1O88597 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC20.11■□□□□ 0.81
Becn1O88597 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Becn1O88597 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Becn1O88597 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Becn1O88597 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.1■□□□□ 0.81
Becn1O88597 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Becn1O88597 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.1■□□□□ 0.81
Becn1O88597 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.1■□□□□ 0.81
Becn1O88597 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Becn1O88597 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.1■□□□□ 0.81
Becn1O88597 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Becn1O88597 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Becn1O88597 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn1O88597 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Becn1O88597 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.09■□□□□ 0.81
Becn1O88597 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Becn1O88597 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Becn1O88597 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Becn1O88597 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.09■□□□□ 0.81
Becn1O88597 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Becn1O88597 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.09■□□□□ 0.81
Becn1O88597 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Becn1O88597 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Becn1O88597 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.08■□□□□ 0.81
Becn1O88597 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Becn1O88597 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Becn1O88597 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Becn1O88597 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Becn1O88597 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Becn1O88597 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Becn1O88597 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Becn1O88597 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Becn1O88597 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms