Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm27463-201ENSMUST00000183569 57 ntBASIC15.05■□□□□ -0
Cldn1O88551 Mir6349-201ENSMUST00000184059 97 ntBASIC15.05■□□□□ -0
Cldn1O88551 Gm17971-201ENSMUST00000190239 806 ntBASIC15.05■□□□□ -0
Cldn1O88551 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.05■□□□□ -0
Cldn1O88551 Gm7461-201ENSMUST00000058918 827 ntBASIC15.05■□□□□ -0
Cldn1O88551 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cldn1O88551 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cldn1O88551 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cldn1O88551 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cldn1O88551 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cldn1O88551 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cldn1O88551 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.04■□□□□ -0
Cldn1O88551 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.04■□□□□ -0
Cldn1O88551 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.04■□□□□ -0
Cldn1O88551 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.04■□□□□ -0
Cldn1O88551 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.04■□□□□ -0
Cldn1O88551 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn1O88551 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.03■□□□□ -0
Cldn1O88551 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.03■□□□□ -0
Cldn1O88551 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.03■□□□□ -0
Cldn1O88551 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.03■□□□□ -0
Cldn1O88551 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn1O88551 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cldn1O88551 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cldn1O88551 Rarb-207ENSMUST00000225921 2756 ntBASIC15.02■□□□□ -0
Cldn1O88551 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.02■□□□□ -0
Cldn1O88551 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cldn1O88551 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.02■□□□□ -0
Cldn1O88551 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.02■□□□□ -0
Cldn1O88551 Gm22697-201ENSMUST00000175194 63 ntBASIC15.02■□□□□ -0
Cldn1O88551 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.02■□□□□ -0
Cldn1O88551 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn1O88551 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn1O88551 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn1O88551 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn1O88551 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Cldn1O88551 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.02□□□□□ -0.01
Cldn1O88551 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.01□□□□□ -0.01
Cldn1O88551 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cldn1O88551 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cldn1O88551 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cldn1O88551 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.01□□□□□ -0.01
Cldn1O88551 Gm17661-201ENSMUST00000170317 270 ntBASIC15.01□□□□□ -0.01
Cldn1O88551 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.01□□□□□ -0.01
Cldn1O88551 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cldn1O88551 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cldn1O88551 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn1O88551 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cldn1O88551 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms