Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.16■□□□□ 0.34
Cacna1hO88427 Gm12644-201ENSMUST00000119935 606 ntBASIC17.16■□□□□ 0.34
Cacna1hO88427 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.16■□□□□ 0.34
Cacna1hO88427 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.16■□□□□ 0.34
Cacna1hO88427 Gm10060-201ENSMUST00000212002 111 ntBASIC17.16■□□□□ 0.34
Cacna1hO88427 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.16■□□□□ 0.34
Cacna1hO88427 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.16■□□□□ 0.34
Cacna1hO88427 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.16■□□□□ 0.34
Cacna1hO88427 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1hO88427 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.15■□□□□ 0.34
Cacna1hO88427 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cacna1hO88427 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.15■□□□□ 0.34
Cacna1hO88427 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.15■□□□□ 0.34
Cacna1hO88427 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1hO88427 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.15■□□□□ 0.34
Cacna1hO88427 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cacna1hO88427 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cacna1hO88427 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cacna1hO88427 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cacna1hO88427 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacna1hO88427 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacna1hO88427 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cacna1hO88427 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1hO88427 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cacna1hO88427 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Cacna1hO88427 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cacna1hO88427 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1hO88427 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cacna1hO88427 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1hO88427 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.12■□□□□ 0.33
Cacna1hO88427 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1hO88427 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1hO88427 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1hO88427 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1hO88427 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1hO88427 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cacna1hO88427 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm7862-201ENSMUST00000121461 292 ntBASIC17.11■□□□□ 0.33
Cacna1hO88427 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.11■□□□□ 0.33
Cacna1hO88427 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1hO88427 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm4995-201ENSMUST00000117247 432 ntBASIC17.11■□□□□ 0.33
Cacna1hO88427 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Gm24513-201ENSMUST00000174964 138 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms