Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Stag3O70576 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC24.21■■□□□ 1.47
Stag3O70576 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC24.21■■□□□ 1.47
Stag3O70576 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Stag3O70576 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Stag3O70576 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Stag3O70576 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Stag3O70576 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Stag3O70576 Dapk1-207ENSMUST00000226059 5009 ntBASIC24.21■■□□□ 1.47
Stag3O70576 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Stag3O70576 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Stag3O70576 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
Stag3O70576 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC24.2■■□□□ 1.47
Stag3O70576 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Stag3O70576 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Stag3O70576 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC24.2■■□□□ 1.46
Stag3O70576 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Stag3O70576 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Stag3O70576 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Stag3O70576 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Stag3O70576 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Stag3O70576 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Gm33142-201ENSMUST00000193913 867 ntBASIC24.19■■□□□ 1.46
Stag3O70576 Gm9731-201ENSMUST00000209480 747 ntBASIC24.19■■□□□ 1.46
Stag3O70576 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Stag3O70576 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Stag3O70576 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Stag3O70576 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Stag3O70576 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Stag3O70576 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Stag3O70576 Gm37025-201ENSMUST00000195159 829 ntBASIC24.18■■□□□ 1.46
Stag3O70576 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Stag3O70576 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Stag3O70576 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Stag3O70576 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC24.18■■□□□ 1.46
Stag3O70576 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Stag3O70576 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Gm35558-201ENSMUST00000222675 2219 ntBASIC24.17■■□□□ 1.46
Stag3O70576 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Stag3O70576 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC24.17■■□□□ 1.46
Stag3O70576 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Stag3O70576 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Stag3O70576 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Stag3O70576 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Stag3O70576 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC24.16■■□□□ 1.46
Stag3O70576 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Stag3O70576 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC24.16■■□□□ 1.46
Stag3O70576 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC24.16■■□□□ 1.46
Stag3O70576 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Stag3O70576 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
Stag3O70576 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Stag3O70576 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
Stag3O70576 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Stag3O70576 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Il3ra-202ENSMUST00000223589 738 ntBASIC24.15■■□□□ 1.46
Stag3O70576 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Stag3O70576 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Stag3O70576 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Stag3O70576 Spsb2-203ENSMUST00000112473 1322 ntBASIC24.14■■□□□ 1.46
Stag3O70576 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Stag3O70576 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Stag3O70576 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Stag3O70576 AC120002.2-201ENSMUST00000220205 773 ntBASIC24.14■■□□□ 1.45
Stag3O70576 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Stag3O70576 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Stag3O70576 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Stag3O70576 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Stag3O70576 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Stag3O70576 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Stag3O70576 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms