Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Rdh5O55240 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.66■□□□□ 0.26
Rdh5O55240 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.66■□□□□ 0.26
Rdh5O55240 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.66■□□□□ 0.26
Rdh5O55240 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.66■□□□□ 0.26
Rdh5O55240 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.66■□□□□ 0.26
Rdh5O55240 Gm10138-203ENSMUST00000206952 366 ntBASIC16.66■□□□□ 0.26
Rdh5O55240 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.66■□□□□ 0.26
Rdh5O55240 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rdh5O55240 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rdh5O55240 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rdh5O55240 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rdh5O55240 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
Rdh5O55240 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.65■□□□□ 0.26
Rdh5O55240 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Gm10418-201ENSMUST00000100943 576 ntBASIC16.65■□□□□ 0.26
Rdh5O55240 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.65■□□□□ 0.26
Rdh5O55240 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Rdh5O55240 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rdh5O55240 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Gm8969-201ENSMUST00000199694 526 ntBASIC16.64■□□□□ 0.25
Rdh5O55240 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.64■□□□□ 0.25
Rdh5O55240 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.64■□□□□ 0.25
Rdh5O55240 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rdh5O55240 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.63■□□□□ 0.25
Rdh5O55240 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Rdh5O55240 Gm15375-201ENSMUST00000119510 849 ntBASIC16.63■□□□□ 0.25
Rdh5O55240 Gm13158-201ENSMUST00000122007 736 ntBASIC16.63■□□□□ 0.25
Rdh5O55240 Mir6349-201ENSMUST00000184059 97 ntBASIC16.63■□□□□ 0.25
Rdh5O55240 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.63■□□□□ 0.25
Rdh5O55240 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Rdh5O55240 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Gm10812-201ENSMUST00000099864 546 ntBASIC16.63■□□□□ 0.25
Rdh5O55240 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.63■□□□□ 0.25
Rdh5O55240 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rdh5O55240 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rdh5O55240 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.62■□□□□ 0.25
Rdh5O55240 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.62■□□□□ 0.25
Rdh5O55240 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.62■□□□□ 0.25
Rdh5O55240 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Rdh5O55240 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms