Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdmt1O55055 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trdmt1O55055 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trdmt1O55055 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trdmt1O55055 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Trdmt1O55055 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trdmt1O55055 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trdmt1O55055 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.39■□□□□ 0.69
Trdmt1O55055 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trdmt1O55055 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Trdmt1O55055 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.38■□□□□ 0.69
Trdmt1O55055 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.38■□□□□ 0.69
Trdmt1O55055 Gm11355-201ENSMUST00000121120 306 ntBASIC19.38■□□□□ 0.69
Trdmt1O55055 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trdmt1O55055 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Gm17808-201ENSMUST00000200859 894 ntBASIC19.38■□□□□ 0.69
Trdmt1O55055 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.38■□□□□ 0.69
Trdmt1O55055 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trdmt1O55055 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trdmt1O55055 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.37■□□□□ 0.69
Trdmt1O55055 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.37■□□□□ 0.69
Trdmt1O55055 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.37■□□□□ 0.69
Trdmt1O55055 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trdmt1O55055 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trdmt1O55055 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdmt1O55055 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trdmt1O55055 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.36■□□□□ 0.69
Trdmt1O55055 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trdmt1O55055 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.36■□□□□ 0.69
Trdmt1O55055 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trdmt1O55055 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdmt1O55055 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.35■□□□□ 0.69
Trdmt1O55055 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trdmt1O55055 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdmt1O55055 Fst-202ENSMUST00000223640 2612 ntBASIC19.35■□□□□ 0.69
Trdmt1O55055 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms