Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.94■□□□□ 0.3
Cacna1bO55017 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cacna1bO55017 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Cacna1bO55017 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cacna1bO55017 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1bO55017 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.94■□□□□ 0.3
Cacna1bO55017 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Cacna1bO55017 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.94■□□□□ 0.3
Cacna1bO55017 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.93■□□□□ 0.3
Cacna1bO55017 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Gm43514-201ENSMUST00000198852 424 ntBASIC16.93■□□□□ 0.3
Cacna1bO55017 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1bO55017 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.93■□□□□ 0.3
Cacna1bO55017 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Gm6443-201ENSMUST00000203599 874 ntBASIC16.92■□□□□ 0.3
Cacna1bO55017 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.92■□□□□ 0.3
Cacna1bO55017 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.92■□□□□ 0.3
Cacna1bO55017 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.92■□□□□ 0.3
Cacna1bO55017 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1bO55017 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cacna1bO55017 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.91■□□□□ 0.3
Cacna1bO55017 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cacna1bO55017 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.91■□□□□ 0.3
Cacna1bO55017 Gm27357-201ENSMUST00000183754 135 ntBASIC16.91■□□□□ 0.3
Cacna1bO55017 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.91■□□□□ 0.3
Cacna1bO55017 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Grk6-206ENSMUST00000224995 2971 ntBASIC16.91■□□□□ 0.3
Cacna1bO55017 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1bO55017 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Gm24589-201ENSMUST00000116692 94 ntBASIC16.9■□□□□ 0.3
Cacna1bO55017 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.9■□□□□ 0.3
Cacna1bO55017 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 Gm13401-201ENSMUST00000117074 291 ntBASIC16.9■□□□□ 0.3
Cacna1bO55017 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1bO55017 Gm7213-201ENSMUST00000215977 950 ntBASIC16.9■□□□□ 0.3
Cacna1bO55017 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Cacna1bO55017 Notumos-201ENSMUST00000151998 2659 ntBASIC16.9■□□□□ 0.3
Cacna1bO55017 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Cacna1bO55017 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Cacna1bO55017 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.89■□□□□ 0.29
Cacna1bO55017 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms