Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Prom1O54990 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.44■□□□□ 0.7
Prom1O54990 Gm9103-201ENSMUST00000119371 405 ntBASIC19.44■□□□□ 0.7
Prom1O54990 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.44■□□□□ 0.7
Prom1O54990 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Prom1O54990 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prom1O54990 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.44■□□□□ 0.7
Prom1O54990 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Prom1O54990 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Prom1O54990 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Prom1O54990 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prom1O54990 Gm14859-201ENSMUST00000117752 357 ntBASIC19.43■□□□□ 0.7
Prom1O54990 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prom1O54990 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.43■□□□□ 0.7
Prom1O54990 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prom1O54990 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prom1O54990 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prom1O54990 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.43■□□□□ 0.7
Prom1O54990 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prom1O54990 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Prom1O54990 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prom1O54990 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.42■□□□□ 0.7
Prom1O54990 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.42■□□□□ 0.7
Prom1O54990 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Gm10566-201ENSMUST00000086739 996 ntBASIC19.42■□□□□ 0.7
Prom1O54990 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prom1O54990 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prom1O54990 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prom1O54990 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Prom1O54990 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.41■□□□□ 0.7
Prom1O54990 Gm10418-201ENSMUST00000100943 576 ntBASIC19.41■□□□□ 0.7
Prom1O54990 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Prom1O54990 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.41■□□□□ 0.7
Prom1O54990 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.41■□□□□ 0.7
Prom1O54990 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prom1O54990 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.4■□□□□ 0.7
Prom1O54990 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prom1O54990 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prom1O54990 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prom1O54990 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.39■□□□□ 0.69
Prom1O54990 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prom1O54990 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.39■□□□□ 0.69
Prom1O54990 Gm7213-201ENSMUST00000215977 950 ntBASIC19.39■□□□□ 0.69
Prom1O54990 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prom1O54990 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prom1O54990 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prom1O54990 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Prom1O54990 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prom1O54990 Gm9731-201ENSMUST00000209480 747 ntBASIC19.38■□□□□ 0.69
Prom1O54990 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prom1O54990 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prom1O54990 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Prom1O54990 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prom1O54990 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Prom1O54990 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.37■□□□□ 0.69
Prom1O54990 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prom1O54990 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prom1O54990 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prom1O54990 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prom1O54990 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prom1O54990 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prom1O54990 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms