Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarce1O54941 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarce1O54941 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smarce1O54941 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarce1O54941 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarce1O54941 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarce1O54941 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarce1O54941 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarce1O54941 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarce1O54941 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarce1O54941 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.92■□□□□ 0.94
Smarce1O54941 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.92■□□□□ 0.94
Smarce1O54941 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smarce1O54941 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smarce1O54941 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.92■□□□□ 0.94
Smarce1O54941 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.92■□□□□ 0.94
Smarce1O54941 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smarce1O54941 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarce1O54941 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Smarce1O54941 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Smarce1O54941 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.91■□□□□ 0.94
Smarce1O54941 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarce1O54941 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smarce1O54941 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.9■□□□□ 0.94
Smarce1O54941 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Zfp783-201ENSMUST00000095946 670 ntBASIC20.9■□□□□ 0.94
Smarce1O54941 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.9■□□□□ 0.94
Smarce1O54941 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smarce1O54941 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smarce1O54941 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarce1O54941 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smarce1O54941 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Smarce1O54941 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smarce1O54941 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarce1O54941 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Smarce1O54941 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarce1O54941 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Smarce1O54941 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarce1O54941 Gm44549-201ENSMUST00000208351 577 ntBASIC20.89■□□□□ 0.93
Smarce1O54941 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
Smarce1O54941 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.89■□□□□ 0.93
Smarce1O54941 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.89■□□□□ 0.93
Smarce1O54941 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarce1O54941 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarce1O54941 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Smarce1O54941 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarce1O54941 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Smarce1O54941 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarce1O54941 Gm10849-201ENSMUST00000100397 618 ntBASIC20.88■□□□□ 0.93
Smarce1O54941 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.88■□□□□ 0.93
Smarce1O54941 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Smarce1O54941 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarce1O54941 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarce1O54941 Flg-201ENSMUST00000050758 1488 ntBASIC20.88■□□□□ 0.93
Smarce1O54941 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Mir8112-201ENSMUST00000184382 131 ntBASIC20.87■□□□□ 0.93
Smarce1O54941 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarce1O54941 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms