Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Limk2O54785 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Rarb-207ENSMUST00000225921 2756 ntBASIC17.86■□□□□ 0.45
Limk2O54785 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk2O54785 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Limk2O54785 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Limk2O54785 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Limk2O54785 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Limk2O54785 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Limk2O54785 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Gm13401-201ENSMUST00000117074 291 ntBASIC17.84■□□□□ 0.45
Limk2O54785 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Gm8969-201ENSMUST00000199694 526 ntBASIC17.84■□□□□ 0.45
Limk2O54785 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.84■□□□□ 0.45
Limk2O54785 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Limk2O54785 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.84■□□□□ 0.45
Limk2O54785 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Limk2O54785 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.83■□□□□ 0.45
Limk2O54785 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Limk2O54785 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Limk2O54785 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Gm42545-201ENSMUST00000202755 922 ntBASIC17.83■□□□□ 0.44
Limk2O54785 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.83■□□□□ 0.44
Limk2O54785 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Limk2O54785 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Limk2O54785 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.83■□□□□ 0.44
Limk2O54785 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Limk2O54785 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Limk2O54785 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.82■□□□□ 0.44
Limk2O54785 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.82■□□□□ 0.44
Limk2O54785 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Gm5417-201ENSMUST00000079706 384 ntBASIC17.82■□□□□ 0.44
Limk2O54785 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.82■□□□□ 0.44
Limk2O54785 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.82■□□□□ 0.44
Limk2O54785 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.82■□□□□ 0.44
Limk2O54785 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Limk2O54785 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.81■□□□□ 0.44
Limk2O54785 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Gm6433-201ENSMUST00000118634 875 ntBASIC17.81■□□□□ 0.44
Limk2O54785 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.81■□□□□ 0.44
Limk2O54785 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.81■□□□□ 0.44
Limk2O54785 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Limk2O54785 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Limk2O54785 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms