Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf11aO35305 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf11aO35305 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Gm10517-202ENSMUST00000192970 758 ntBASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf11aO35305 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Gm8969-201ENSMUST00000199694 526 ntBASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf11aO35305 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Tnfrsf11aO35305 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Mir1199-201ENSMUST00000117015 119 ntBASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf11aO35305 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Gm10812-201ENSMUST00000099864 546 ntBASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf11aO35305 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms