Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3aO08759 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube3aO08759 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ube3aO08759 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ube3aO08759 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3aO08759 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3aO08759 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3aO08759 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.03■□□□□ 0.64
Ube3aO08759 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3aO08759 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3aO08759 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube3aO08759 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.03■□□□□ 0.64
Ube3aO08759 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ube3aO08759 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3aO08759 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3aO08759 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3aO08759 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3aO08759 Gm10849-201ENSMUST00000100397 618 ntBASIC19.02■□□□□ 0.64
Ube3aO08759 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3aO08759 Gm7291-201ENSMUST00000199147 382 ntBASIC19.02■□□□□ 0.64
Ube3aO08759 Gm42569-201ENSMUST00000200539 472 ntBASIC19.02■□□□□ 0.64
Ube3aO08759 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3aO08759 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.02■□□□□ 0.64
Ube3aO08759 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.02■□□□□ 0.64
Ube3aO08759 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube3aO08759 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.02■□□□□ 0.64
Ube3aO08759 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ube3aO08759 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Ube3aO08759 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.01■□□□□ 0.63
Ube3aO08759 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.01■□□□□ 0.63
Ube3aO08759 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube3aO08759 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19■□□□□ 0.63
Ube3aO08759 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3aO08759 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Ube3aO08759 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ube3aO08759 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ube3aO08759 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Gm27405-201ENSMUST00000184201 112 ntBASIC18.99■□□□□ 0.63
Ube3aO08759 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.99■□□□□ 0.63
Ube3aO08759 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ube3aO08759 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.99■□□□□ 0.63
Ube3aO08759 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3aO08759 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.98■□□□□ 0.63
Ube3aO08759 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ube3aO08759 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ube3aO08759 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.98■□□□□ 0.63
Ube3aO08759 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.98■□□□□ 0.63
Ube3aO08759 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3aO08759 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.97■□□□□ 0.63
Ube3aO08759 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ube3aO08759 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3aO08759 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms